Publications

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Publications

 

  • Polina, Iuliia, Jyotsna Mishra, Michael W Cypress, Maria Landherr, Nedyalka Valkov, Isabel Chaput, Bridget Nieto, et al. 2026. “Mitochondrial Ca2+ Uniporter (MCU) Variants Form Plasma-Membrane Channels”. Commun Biol. Online ahead of print. https://doi.org/10.1038/s42003-026-10285-x.

    MCU, originally known as CCDC109A, is widely recognized as the gene responsible for encoding a pore-forming subunit of a Ca2+-selective channel, mitochondrial Ca2+ uniporter complex (mtCUC). While MCU expression is typically highly mitochondrial-specific, we report here a protein variant derived from the MCU gene, termed MCU-S, which lacks the mitochondria-targeting sequence (MTS) and forms a Ca2+-permeable channel outside of mitochondria. The mRNA of MCU-S was ubiquitously expressed in all cell types/tissues tested, with particularly high expression in human platelets. MCU-S protein formed Ca2+ channels at the plasma membrane, which exhibited similar channel properties to those observed in mtCUC. MCU-S channels at the plasma membrane served as an additional Ca2+ influx pathway for platelet activation. Our findings show that the MCU-S functions are completely distinct from the originally reported functions of the MCU gene and provide additional insights into the molecular importance of MCU variant-dependent cellular Ca2+ handling.

  • Landherr, Maria, luliia Polina, Michael W Cypress, Brian Rhee, Kye-Im Jeon, Sanjana Chandran, Isabel Chaput, et al. 2025. “SARS-CoV-2-ORF3a Variant Q57H Reduces Its Pro-Apoptotic Activity in Host Cells”. F1000Res. 2025 Nov 22:13:331. Doi: 10.12688/F1000research.146123.2. ECollection 2024. 22.

    Background: Mutations in the viral genome of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) can enhance its pathogenicity by affecting its transmissibility, disease severity, and overall mortality in human populations. In addition to mutations within the coding region of SARS-CoV-2 structural proteins, there have been reports of mutations in other SARS-CoV-2 proteins that affect virulence, such as open reading frame 3a (ORF3a), which is involved in viral replication. The expression of ORF3a in host cells activates cell death signaling, leading to tissue damage, which affects the severity of COVID-19. The ORF3a-Q57H variant is the most frequent and recurrent variant of ORF3a and is likely associated with increased transmissibility but lower mortality in the 4th epidemic wave of COVID-19 in Hong Kong. Computational structural modeling predicted that the Q57H variant destabilizes the protein structure of ORF3a, which may result in reduced protein expression in human cells. However, it is still unknown how this mutation affects ORF3a protein function and, if so, whether it can change the severity of host cell damage.

    Methods: Plasmids carrying SARS-CoV-2-ORF3a from Wuhan-Hu-1 strain (i.e., wild-type; WT) and its variant Q57H were transiently transfected into HEK293T cells and used for biochemical and cell biological assays.

    Results: SARS-CoV-2-ORF3a-Q57H variant exhibits similar protein expression in whole cell lysates compared to WT, but less expression at the plasma membrane. ORF3a-Q57H expression results in less apoptosis in host cells compared to WT via lower activation of the extrinsic apoptotic pathway.

    Conclusion: The relatively mild phenotype of the SARS-CoV-2-ORF3a-Q57H variant may result from alterations to ORF3a function by this mutation, rather than its protein expression levels in host cells.

    Keywords: apoptosis; cell death; cell signaling; mitochondria.

  • Jhun, Bong Sook, Jin O-Uchi, Brian Rhee, Ameneh Ahrari, Nathan DeMichaelis, Kye-Im Jeon, David M Booth, and Shey-Shing Sheu. 2025. “Sarcoplasmic Reticulum-Mitochondria Microdomains: Hugging and Kissing in the Heart”. Am J Physiol Cell Physiol. 329(2):C599-C610. Https://Doi.org/10.1152/Ajpcell.00435.2025.

    Endoplasmic reticulum (ER)-mitochondrial (ER-Mito) interface, termed mitochondrial-ER contacts (MERCs), plays significant roles in the maintenance of bioenergetics and basal cell functions via the exchange of lipids, Ca2+, and reactive oxygen species (ROS) in various cell types/tissues. Genetic deletion of mitofusin 2 (Mfn2), one of the key components of ER-Mito tethering, in cardiomyocytes (CMs) in vivo revealed the importance of the microdomains between mitochondria and sarcoplasmic reticulum (SR), a differentiated form of ER in muscle cells, for maintaining normal mitochondrial Ca2+ (mtCa2+) handling and bioenergetics in the adult heart. However, key questions remain to be answered: 1) What tethering proteins sustain SR-Mito contact site structure in SR-Mito contact sites in the adult ventricular CMs (AVCMs), the predominant cell type in the adult heart? 2) Which MERC proteins operate in AVCMs to mediate specific microdomain functions under physiological conditions? and 3) How are the MERC protein expression profile and function altered in cardiac pathophysiology? In this review, we summarize current knowledge regarding the structure, function, and regulation of SR-Mito microdomains in the heart, with particular focus on AVCMs, which display unique membrane organization and Ca2+ handling compared with other cell types. We further explore molecular mechanisms underpinning microdomain dysfunction in cardiac diseases and highlight the emerging roles of MERC proteins in the development and progression of cardiac pathology.

  • Nieto, Bridget, Michael W Cypress, Bong Sook Jhun, and Jin O-Uchi. 2024. “Adeno-Associated Virus-Based Approach for Genetic Modification of Cardiac Fibroblasts in Adult Rat Hearts.”. Physiological Reports 12 (6): e15989. https://doi.org/10.14814/phy2.15989.

    Cardiac fibroblasts (CFs) are an attractive target for reducing pathological cardiac remodeling, and understanding the underlying mechanisms of these processes is the key to develop successful therapies for treating the pressure-overloaded heart. CF-specific knockout (KO) mouse lines with a Cre recombinase under the control of human TCF21 (hTCF21) promoter and/or an adeno-associated virus serotype 9 (AAV9)-hTCF21 system provide a powerful tool for understanding CF biology in vivo. Although a variety of rat disease models are vital for the research of cardiac fibrosis similar to mouse models, there are few rat models that employ cardiac cell-specific conditional gene modification, which has hindered the development and translational relevance of cardiac disease models. In addition, to date, there are no reports of gene manipulation specifically in rat CFs in vivo. Here, we report a simplified CF-specific rat transgenic model using an AAV9-hTCF21 system that achieved a CF-specific expression of transgene in adult rat hearts. Moreover, we successfully applied this approach to specifically manipulate mitochondrial morphology in quiescent CFs. In summary, this model will allow us to develop fast and simple rat CF-specific transgenic models for studying cardiovascular diseases in vivo.

  • Kazmirczak, Felipe, Lynn M Hartweck, Neal T Vogel, Jenna B Mendelson, Anna K Park, Rashmi M Raveendran, Jin O-Uchi, Bong Sook Jhun, Sasha Z Prisco, and Kurt W Prins. 2023. “Intermittent Fasting Activates AMP-Kinase to Restructure Right Ventricular Lipid Metabolism And Microtubules.”. JACC. Basic to Translational Science 8 (3): 239-54. https://doi.org/10.1016/j.jacbts.2022.12.001.

    Intermittent fasting (IF) extends life span via pleotropic mechanisms, but one important molecular mediator is adenosine monophosphate-activated protein kinase (AMPK). AMPK enhances lipid metabolism and modulates microtubule dynamics. Dysregulation of these molecular pathways causes right ventricular (RV) failure in patients with pulmonary arterial hypertension. In rodent pulmonary arterial hypertension, IF activates RV AMPK, which restores mitochondrial and peroxisomal morphology and restructures mitochondrial and peroxisomal lipid metabolism protein regulation. In addition, IF increases electron transport chain protein abundance and activity in the right ventricle. Echocardiographic and hemodynamic measures of RV function are positively associated with fatty acid oxidation and electron transport chain protein levels. IF also combats heightened microtubule density, which normalizes transverse tubule structure.

  • Polina, Iuliia, Jyotsna Mishra, Michael W Cypress, Maria Landherr, Nedyalka Valkov, Isabel Chaput, Bridget Nieto, et al. 2023. “Mitochondrial Ca 2+ Uniporter (MCU) Variants Form Plasma-Membrane Channels.”. BioRxiv : The Preprint Server for Biology. https://doi.org/10.1101/2023.07.31.551242.

    MCU is widely recognized as a responsible gene for encoding a pore-forming subunit of highly mitochondrial-specific and Ca 2+ -selective channel, mitochondrial Ca 2+ uniporter complex (mtCUC). Here, we report a novel short variant derived from the MCU gene (termed MCU-S) which lacks mitochondria-targeted sequence and forms a Ca 2+ - permeable channel outside of mitochondria. MCU-S was ubiquitously expressed in all cell-types/tissues, with particularly high expression in human platelets. MCU-S formed Ca 2+ channels at the plasma membrane, which exhibited similar channel properties to those observed in mtCUC. MCU-S channels at the plasma membrane served as an additional Ca 2+ influx pathway for platelet activation. Our finding is completely distinct from the originally reported MCU gene function and provides novel insights into the molecular basis of MCU variant-dependent cellular Ca 2+ handling.